Identifier pattern
Preferred namespace URI
Preferred namespace prefix
plant_experimental_conditions_ontologyExample of resource
General information
Languages
Categories
Subjects
Keywords
Identifiers
URI
Version IRI
Other identifier
StagePortal URI
Creation date
Submission date
Is format of
Has format
Source
Indexed or included in catalog or repository
Created with
ProtégéRepository
Bug database
Award
Global Core Biodata Resource 2023Groups
Identifier pattern
Preferred namespace URI
Preferred namespace prefix
plant_experimental_conditions_ontologyExample of resource
Type a class name from PECO and jump to it in StagePortal
var BP_include_definitions = true;
<div id="bp_quick_jump"></div> <script type="text/javascript"> var BP_ontology_id = "PECO";</script> <script src="quick_jump.js" type="text/javascript" charset="utf-8"></script>
For more help visit Widget Wiki
Fill your form fields with classes from PECO
Example 1 (start typing the class name to get its full URI)
Example 2 (get the ID for a class)
Example 3 (get the preferred name for a class)
bp_form_complete-{ontology_id_list}-{value}
bp_form_complete-NCIT-uri
will use a ontology (ontology id is acronym) and will put the class URI in the field after the user selects the class from the pull-down list.
bp_form_complete-NCIT,NCBITAXON-uri
bp_form_complete-all-uri
uri
Put the complete URI of the class (e.g.,
http://purl.obolibrary.org/obo/EO_0007263
)
shortid
put the short id of the class, as used in StagePortal (e.g., "Common_Neoplasm");
name
put the preferred name of the class (e.g., "Common Neoplasm");
<input type="text" name="a" class="bp_form_complete-all-uri" size="100"/>
<input type="hidden" id="a_bioportal_preferred_name">
<input type="hidden" id="a_bioportal_concept_id">
<input type="hidden" id="a_bioportal_ontology_id">
<input type="hidden" id="a_bioportal_full_id">
For more help visit NCBO Widget Wiki
Display a visualization for a given class/concept in PECO
<iframe frameborder="0" src="/widgets/visualization?ontology=PECO&class=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FEO_0007263&apikey=YOUR_API_KEY"></iframe>
For more help visit NCBO Widget Wiki
Display class/concept hiearchy tree with a search field for ontology PECO
<link rel="stylesheet" type="text/css" href="/widgets/jquery.ncbo.tree.css"> <script src="/widgets/jquery.ncbo.tree-2.0.2.js"></script> <div id="widget_tree"></div> var widget_tree = $("#widget_tree").NCBOTree({ apikey: "YOUR_API_KEY", ontology: "PECO" });
You can also view a detailed demonstration
For more help visit Widget Wiki