This thesaurus gathers milk oligosaccharide synonyms.

Research community in Lifesciences

mammals; milk; oligosaccharide; glycan;

Milk Oligosaccaharide Thesaurus - HoloOLIGO project

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HoloOLIGO - ANR-21-CE20-0045

July 12, 2023

The thesaurus can be used for text data mining. In order to gain knowledge on the role of milk oligosaccharides (MOs) it is necessary to find, visualize and analyze MO patterns that are scattered in thousands of scientific papers.In order to automatically extract these data from the literature, making a thesaurus available to normalize MO entities is an essential step. Thus, MilkOligoThesaurus contains synonyms for different MO structures, ensuring consistency and facilitating data exchange and integration.

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(i) List the most commonly identified MOs by analyzing selected key references scientific articles; (ii) Propose a name for the MOs with heterogenous names found in the selected articles and in the chemical databases, or the MOs without names; (iii) Index MO synonyms

February 22, 2024

Sylvie Combes

MilkOligoThesaurus contains the names, synonyms, abbreviations and abbreviated IUPAC condensed chemical form of 245 MOs collected from selected key articles on mammalian milk analyses. When available each unique MO molecule is linked to its ID from the NCBI PubChem and ChEBI databases. The DOI of sources of the collected information is provided.

2.0

Mathilde Rumeau